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Intron Name: Anas_platyrhynchos_platyrhynchos_11_14116009_14171538_R

Intron Information:

Intron Rank:

141695

Intron Class:

major

Intron Phase:

Intron Coordinates:

14116009 - 14171538

Intron Length:

55530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTGG

5'SS Class:

major

3'SS Sequence:

CCTCTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TATTGCTTCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

61.8

45.3

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

80.3

0.68

0.7

75.2

Minor 5ss

34.6

-1.8

2.9

41.3

45.1

Minor BPS

50.8

-0.1

2.2

64.11

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024047

14115742 - 14171628

55887