Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_14116009_14175247_R

Intron Information:

Intron Rank:

141694

Intron Class:

major

Intron Phase:

Intron Coordinates:

14116009 - 14175247

Intron Length:

59239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TATTGCTTCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

37.9

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

80.3

0.68

0.7

75.2

Minor 5ss

40.8

-1

3.1

58.8

45.7

Minor BPS

50.8

-0.1

2.2

64.11

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023180

14101838 - 14175460

73623