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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1427225_1427722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1427225 - 1427722

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TATTCATACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GATTATTTAAAA

Flanking Amino Acid:

VGIFNYSGAEDLFNKLVSLT

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.43

0.9

67.5

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

59.8

0.31

1.6

68.02

37.5

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102