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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1428835_1429546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1428835 - 1429546

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAGTC

5'SS Class:

major

3'SS Sequence:

GAATTTACAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTCTTTGAATT

Flanking Amino Acid:

ITKIHSKRFREYCNQVLSKE

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

67.1

37.2

Major BPS

74.6

0.61

1.4

34.5

Major PPT

62.4

0.28

1.1

56.3

42.9

Minor 5ss

36.3

-1.6

3.5

47.3

42.5

Minor BPS

65.5

0.57

1.3

81.72

33.6

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102