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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1429710_1430678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1429710 - 1430678

Intron Length:

969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

AACTGTTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TGTTTCAAAACT

Flanking Amino Acid:

DQSQELASQEETGLSMPSDA

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.1

0.61

0.9

73.3

41.1

Minor 5ss

34.2

-1.8

2.9

44.7

43.1

Minor BPS

58.2

0.34

81.33

40.1

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102