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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1432212_1433634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1432212 - 1433634

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTCTC

5'SS Class:

major

3'SS Sequence:

TTCTTGTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

TTTTAGTGAAAC

Flanking Amino Acid:

ITNTRPLSYTVGSAAPFHTK

Intron Amino Acid Position:

519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

69.2

41.7

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

78.2

0.63

0.9

77.6

35.8

Minor 5ss

37.8

-1.4

3.2

53.5

43.6

Minor BPS

47.7

-0.1

2.4

69.94

40.8

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102