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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1434099_1435065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1434099 - 1435065

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTAAAATCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AGGTCTTTAATG

Flanking Amino Acid:

NIQQKISPKVLDDLPENSPI

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

76.9

31.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

65.6

0.35

56.4

43.1

Minor 5ss

37.9

-1.4

2.7

47.4

36.1

Minor BPS

66.6

0.38

1.3

62.17

40.4

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102