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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1435150_1435539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1435150 - 1435539

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTACTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TCATTCTTAATT

Flanking Amino Acid:

EQSPEPLYFEDEDEFPELNS

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

72.3

39.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

74.7

0.56

0.9

73.5

36.7

Minor 5ss

40.4

-1.1

3.3

55.5

48.6

Minor BPS

78.1

0.96

1.1

84.08

37.1

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102