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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1436835_1436920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1436835 - 1436920

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AACATCTAAAAT

Flanking Amino Acid:

SRNTDSCAVNVVEPSVNTTG

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

77.9

31.2

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

0.99

0.5

92.6

17.2

Minor 5ss

43.6

-0.7

2.6

54.9

42.7

Minor BPS

47.7

-0.1

1.8

61.15

42.3

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004866

1425382 - 1450483

25102

ENSAPLT00000020322

1423882 - 1450483

26602