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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1437738_1438252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1437738 - 1438252

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTAAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AATCTTTTAAAA

Flanking Amino Acid:

SSNRGPVIQKQQQLQMHIRN

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

75.5

40.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.54

70.9

37.6

Minor 5ss

44.7

-0.6

2.9

58.1

40.6

Minor BPS

59.8

0.3

1.3

65.51

33.9

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102