Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_143850_143926_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143850 - 143926

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGTTTTTTATTT

Flanking Amino Acid:

DMIMAFAVNKANSNEIVLAS

Intron Amino Acid Position:

2687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

75.5

40.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.3

0.5

0.9

68.9

37.2

Minor 5ss

45.5

-0.5

3.1

65.9

39.3

Minor BPS

60.1

0.4

1.5

74.2

37.2

Associated Gene:

Gene:

DMXL2

Ensembl Gene ID:

ENSAPLG00000008330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022556

136006 - 191755

55750

ENSAPLT00000008801

136000 - 191755

55756

ENSAPLT00000038574

136000 - 191755

55756