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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1438578_1439166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1438578 - 1439166

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATACAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTTTTTACA

Flanking Amino Acid:

YPFVQENQSNRQFPLYNSDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

73.5

37.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

98.8

1.1

0.5

95.2

16.3

Minor 5ss

33.7

-1.9

3.2

47.5

Minor BPS

71.2

0.66

1.5

82.45

31.9

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102