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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1439346_1450465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1439346 - 1450465

Intron Length:

11120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGCC

5'SS Class:

major

3'SS Sequence:

TTTCTTTCTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTCTTTCTAAAG

Flanking Amino Acid:

MDKADKNVKLSAEVEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

63.7

36.4

Major BPS

78.2

0.7

77.9

32.1

Major PPT

80.7

0.69

0.9

82.5

26.7

Minor 5ss

-3

3.4

32.8

42.4

Minor BPS

50.1

-0.1

1.8

60.47

41.7

Associated Gene:

Gene:

SECISBP2L

Ensembl Gene ID:

ENSAPLG00000004694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020322

1423882 - 1450483

26602

ENSAPLT00000004866

1425382 - 1450483

25102