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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1462144_1464423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1462144 - 1464423

Intron Length:

2280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTCTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AAGACAGTAATT

Flanking Amino Acid:

PEILAMTNLVSAYQNNDIAE

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

75.6

32.9

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

44.9

-0.3

2.2

61.61

42.1

Associated Gene:

Gene:

COPS2

Ensembl Gene ID:

ENSAPLG00000004440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004607

1458092 - 1471410

13319