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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1468511_1469107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1468511 - 1469107

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTTTTCTTTATA

Flanking Amino Acid:

KQMIKINFKLTNFPEMMNRY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

80.4

0.76

80.3

31.8

Major PPT

91.9

0.94

0.6

88.3

21.5

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

72.4

0.7

1.5

82.54

31.8

Associated Gene:

Gene:

COPS2

Ensembl Gene ID:

ENSAPLG00000004440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004607

1458092 - 1471410

13319