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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1469186_1470191_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1469186 - 1470191

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTTTTC

5'SS Class:

weak_major

3'SS Sequence:

GTTTCTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GACTGTTTAAAA

Flanking Amino Acid:

PKAALSSFQKVLELEGEKGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

68.9

36.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.6

0.78

0.8

81.9

34.4

Minor 5ss

47.3

-0.3

2.4

62.4

42.1

Minor BPS

49.6

-0

1.9

58.26

41.2

Associated Gene:

Gene:

COPS2

Ensembl Gene ID:

ENSAPLG00000004440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004607

1458092 - 1471410

13319