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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1482739_1484889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1482739 - 1484889

Intron Length:

2151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ACCTGCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AGGTTTTCAACC

Flanking Amino Acid:

SLPVQVVEQPRLLKLKESFI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

74.2

0.55

0.9

69.5

36.2

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

55.2

0.14

1.5

61.19

38.2

Associated Gene:

Gene:

GALK2

Ensembl Gene ID:

ENSAPLG00000004342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021501

1482686 - 1537557

54872

ENSAPLT00000004482

1482686 - 1537557

54872