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Intron Name: Anas_platyrhynchos_platyrhynchos_11_14859916_14862112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14859916 - 14862112

Intron Length:

2197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAA

U12 Branch Point Sequence:

AATACCTCAAAG

Flanking Amino Acid:

IHRNGEYRNDKFIGMKFKEV

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

64.3

0.36

65.6

31.9

Major PPT

0.47

0.8

61.6

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

-0

1.8

58.24

42.4

Associated Gene:

Gene:

SV2B

Ensembl Gene ID:

ENSAPLG00000014580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015210

14839546 - 14867651

28106