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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15088739_15096608_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15088739 - 15096608

Intron Length:

7870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAC

U12 Branch Point Sequence:

TGCACGATAACA

Flanking Amino Acid:

NSTTCFQQLRVIPKVTKHLL

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

52.3

0.06

1.1

61.1

34.5

Major PPT

80.3

0.68

0.7

31.9

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

46.6

-0.2

2.3

61.93

43.7

Associated Gene:

Gene:

SLCO3A1

Ensembl Gene ID:

ENSAPLG00000012595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040876

14991194 - 15141968

150775

ENSAPLT00000025293

14991194 - 15108918

117725

ENSAPLT00000013125

14991194 - 15112368

121175

ENSAPLT00000012804

14991194 - 15112524

121331