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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15177715_15179483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15177715 - 15179483

Intron Length:

1769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCATAT

U12 Branch Point Sequence:

ATCCACTGCAGA

Flanking Amino Acid:

PEIDAHSFVIRCNLAPVQEY

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

61.9

0.3

1.1

58.6

38.7

Major PPT

82.3

0.73

0.7

77.1

24.7

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

39.2

-0.8

2.1

49.04

41.3

Associated Gene:

Gene:

ST8SIA2

Ensembl Gene ID:

ENSAPLG00000012464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012987

15161319 - 15188015

26697