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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15271631_15276051_F

Intron Information:

Intron Rank:

140999

Intron Class:

major

Intron Phase:

Intron Coordinates:

15271631 - 15276051

Intron Length:

4421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCGCAT

U12 Branch Point Sequence:

ATTCGCATACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.1

43.1

Major BPS

0.5

1.4

79.6

35.6

Major PPT

88.7

0.87

0.6

89.2

19.8

Minor 5ss

46.1

-0.4

2.9

65.4

45.8

Minor BPS

45.2

-0.2

2.2

68.68

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046446

15271172 - 15276931

5760