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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15316494_15317120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15316494 - 15317120

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCAACCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAA

U12 Branch Point Sequence:

GTGTCTCCAACC

Flanking Amino Acid:

KQYQIVERVIAVKTSKSATG

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

57.2

0.18

1.1

58.3

34.3

Major PPT

69.5

0.44

0.9

62.3

32.1

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

49.9

-0

1.9

64.21

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033486

15302688 - 15317558

14871