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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15317508_15318239_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15317508 - 15318239

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGCTTG

5'SS Class:

weak_major

3'SS Sequence:

TCATCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

TTTTTCTCCAGT

Flanking Amino Acid:

SKTIPTRDCKVLKQRPRFVA

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.2

63.5

43.2

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

86.1

0.81

0.8

84.3

30.3

Minor 5ss

49.9

-0

2.4

64.8

46.5

Minor BPS

50.1

0.08

2.2

79.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041699

15302688 - 15318434

15747