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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1531989_1537439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1531989 - 1537439

Intron Length:

5451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

AGTTTTCTATTT

Flanking Amino Acid:

KKAYYQSDVQSEHPLCLLTF

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

36.1

Major BPS

70.4

0.51

67.1

39.4

Major PPT

93.7

0.98

0.6

88.2

29.1

Minor 5ss

41.7

-0.9

2.9

58.2

46.1

Minor BPS

47.7

-0

1.8

67.06

38.2

Associated Gene:

Gene:

GALK2

Ensembl Gene ID:

ENSAPLG00000004342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026113

1482988 - 1537557

54570

ENSAPLT00000021501

1482686 - 1537557

54872

ENSAPLT00000004482

1482686 - 1537557

54872