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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15351963_15355189_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15351963 - 15355189

Intron Length:

3227

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCTGTCACA

5'SS Class:

major

3'SS Sequence:

TCTCTGCTGAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAG

U12 Branch Point Sequence:

AATAAGGAAACT

Flanking Amino Acid:

CWSLLNPRLAAWLCRSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.4

55.8

Major BPS

59.6

0.24

1.5

57.3

41.7

Major PPT

50.5

0.01

1.7

60.4

40.4

Minor 5ss

24.4

-2.9

3.7

32.9

41.6

Minor BPS

35.7

-1

2.6

57.19

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046573

15351940 - 15356987

5048