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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15353073_15364993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15353073 - 15364993

Intron Length:

11921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

ACCCTCCACGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCCTCCCACC

Flanking Amino Acid:

LPVFLCIFPSVTSPCKILKC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

64.4

0.32

0.9

58.2

31.3

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

45.1

-0.4

2.2

64.86

40.6

Associated Gene:

Gene:

RGMA

Ensembl Gene ID:

ENSAPLG00000024033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038851

15348492 - 15371328

22837