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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15355416_15356951_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15355416 - 15356951

Intron Length:

1536

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCAGGAGGA

5'SS Class:

major

3'SS Sequence:

GGCCTGCACGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TCGGCCTGCACG

Flanking Amino Acid:

RRGSSTAPGEPGACVCSSAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

63.1

Major BPS

73.5

0.58

79.3

29.4

Major PPT

53.5

0.08

0.9

46.7

35.7

Minor 5ss

19.8

-3.5

4.1

28.4

37.8

Minor BPS

46.1

-0.4

2.1

51.53

48.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046573

15351940 - 15356987

5048