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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15668599_15688266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15668599 - 15688266

Intron Length:

19668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

CTTTGCTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

77.1

0.67

77.9

32.2

Major PPT

0.81

0.8

79.7

32.4

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

60.2

0.32

2.1

75.18

42.3

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046165

15667753 - 15790439

122687