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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15688371_15689156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15688371 - 15689156

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAGGTGAT

5'SS Class:

major

3'SS Sequence:

ACGTTCCTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TTTTCCTGACTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

66.4

39.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

73.5

0.53

0.9

70.5

35.6

Minor 5ss

35.2

-1.7

3.6

53.6

44.8

Minor BPS

62.5

0.25

1.8

72.16

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046165

15667753 - 15790439

122687

ENSAPLT00000045838

15676442 - 15788186

111745