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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15706799_15707980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15706799 - 15707980

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

FVALTELELNRTTEQVLKLE

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

74.4

36.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

39.7

-1.2

3.1

57.2

46.8

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028041

15671613 - 15788186

116574

ENSAPLT00000011138

15671613 - 15790439

118827

ENSAPLT00000046165

15667753 - 15790439

122687

ENSAPLT00000045838

15676442 - 15788186

111745