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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15708096_15710086_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15708096 - 15710086

Intron Length:

1991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GACTCCTGAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

GACTCCTGAACA

Flanking Amino Acid:

VKQGDFKRNNRWSNRKKRSS

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

37.8

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

59.7

0.22

1.1

54.2

Minor 5ss

35.5

-1.7

3.3

48.1

41.3

Minor BPS

67.8

0.55

1.5

70.71

40.8

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011138

15671613 - 15790439

118827

ENSAPLT00000046165

15667753 - 15790439

122687

ENSAPLT00000045838

15676442 - 15788186

111745

ENSAPLT00000028041

15671613 - 15788186

116574