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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15718804_15720482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15718804 - 15720482

Intron Length:

1679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GCATGTTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

AATATTATAACT

Flanking Amino Acid:

KLGDQRYKSKTLCKSANPQW

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

75.9

0.64

66.1

40.5

Major PPT

70.6

0.46

61.7

44.3

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

55.9

0.26

1.6

73.08

37.3

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045838

15676442 - 15788186

111745

ENSAPLT00000028041

15671613 - 15788186

116574

ENSAPLT00000011138

15671613 - 15790439

118827

ENSAPLT00000046165

15667753 - 15790439

122687