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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15728362_15732480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15728362 - 15732480

Intron Length:

4119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCCGT

5'SS Class:

major

3'SS Sequence:

GATCTTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTTCTAATT

Flanking Amino Acid:

AVDLLAADFAGKSDPFCVLE

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

58.1

46.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.49

0.8

36.1

Minor 5ss

45.7

-0.4

2.9

65.9

Minor BPS

63.4

0.5

1.6

80.83

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046165

15667753 - 15790439

122687

ENSAPLT00000045838

15676442 - 15788186

111745

ENSAPLT00000028041

15671613 - 15788186

116574

ENSAPLT00000011138

15671613 - 15790439

118827