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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15744325_15745337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15744325 - 15745337

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

YLELDVLFNPVKASIRTFKP

Intron Amino Acid Position:

754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

73.6

33.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

42.4

-0.8

2.9

45.5

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046165

15667753 - 15790439

122687

ENSAPLT00000045838

15676442 - 15788186

111745

ENSAPLT00000028041

15671613 - 15788186

116574

ENSAPLT00000011138

15671613 - 15790439

118827