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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15745413_15769598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15745413 - 15769598

Intron Length:

24186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

ATTGCTTTATTT

Flanking Amino Acid:

TEENCKFSKKVFVVTVWSVE

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

84.9

32.1

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

84.2

0.77

0.8

77.4

36.7

Minor 5ss

37.6

-1.4

3.5

56.9

47.4

Minor BPS

61.2

0.43

1.7

77.64

39.7

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011138

15671613 - 15790439

118827