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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15746339_15769598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15746339 - 15769598

Intron Length:

23260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

ATTGCTTTATTT

Flanking Amino Acid:

STVKSMIAFVVFVVTVWSVE

Intron Amino Acid Position:

819

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

84.2

0.77

0.8

77.4

36.7

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

61.2

0.43

1.7

77.64

39.7

Associated Gene:

Gene:

MCTP2

Ensembl Gene ID:

ENSAPLG00000010678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028041

15671613 - 15788186

116574

ENSAPLT00000046165

15667753 - 15790439

122687

ENSAPLT00000045838

15676442 - 15788186

111745