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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15809387_15811873_F

Intron Information:

Intron Rank:

142549

Intron Class:

major

Intron Phase:

Intron Coordinates:

15809387 - 15811873

Intron Length:

2487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

72.7

38.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

37.7

-1.4

2.8

48.3

41.7

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038836

15809138 - 15815181

6044

ENSAPLT00000041176

15807309 - 15814112

6804