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Intron Name: Anas_platyrhynchos_platyrhynchos_11_15812011_15815154_F

Intron Information:

Intron Rank:

142550

Intron Class:

major

Intron Phase:

Intron Coordinates:

15812011 - 15815154

Intron Length:

3144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

AGTACTGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

33.4

Major BPS

73.5

0.58

79.3

29.4

Major PPT

89.1

0.88

0.6

87.7

22.4

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

55.8

0.26

2.1

75.87

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038836

15809138 - 15815181

6044