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Intron Name: Anas_platyrhynchos_platyrhynchos_11_16184846_16185369_F

Intron Information:

Intron Rank:

141505

Intron Class:

major

Intron Phase:

Intron Coordinates:

16184846 - 16185369

Intron Length:

524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTAAATGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTATTGTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

66.1

0.36

1.1

63.8

45.9

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

59.8

0.39

2.1

81.73

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037109

16181145 - 16189491

8347

ENSAPLT00000036170

16181145 - 16186971

5827