Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_1625037_1625297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1625037 - 1625297

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

TTTTTCTTAATA

Flanking Amino Acid:

CEAERSKIISWLLQVELKTR

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

83.8

0.76

0.8

81.8

28.7

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

87.5

1.17

0.8

90.77

23.3

Associated Gene:

Gene:

DTWD1

Ensembl Gene ID:

ENSAPLG00000004237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042643

1618045 - 1625527

7483