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Intron Name: Anas_platyrhynchos_platyrhynchos_11_16267310_16267389_R

Intron Information:

Intron Rank:

150990

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16267310 - 16267389

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAATTTTA

5'SS Class:

weak_major

3'SS Sequence:

CCCTCTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTTAGCCTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.1

70.2

36.3

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

81.2

0.7

75.8

26.2

Minor 5ss

46.8

-0.3

2.8

68.2

42.6

Minor BPS

49.5

-0.1

2.2

64.83

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042065

16265231 - 16267579

2349