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Intron Name: Anas_platyrhynchos_platyrhynchos_11_16267310_16274112_R

Intron Information:

Intron Rank:

150985

Intron Class:

major

Intron Phase:

Intron Coordinates:

16267310 - 16274112

Intron Length:

6803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTTAGCCTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

38.2

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

81.2

0.7

75.8

26.2

Minor 5ss

31.2

-2.2

3.4

41.6

45.4

Minor BPS

49.5

-0.1

2.2

64.83

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024272

16265231 - 16274372

9142