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Intron Name: Anas_platyrhynchos_platyrhynchos_11_16354687_16355164_R

Intron Information:

Intron Rank:

139012

Intron Class:

major

Intron Phase:

Intron Coordinates:

16354687 - 16355164

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CCCATCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

TGACACATATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.2

30.7

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

72.9

0.51

0.8

64.1

36.6

Minor 5ss

37.9

-1.4

2.9

40.8

45.4

Minor BPS

44.4

-0.4

56.29

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021249

16354468 - 16357289

2822