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Intron Name: Anas_platyrhynchos_platyrhynchos_11_16532570_16542218_F

Intron Information:

Intron Rank:

131423

Intron Class:

major

Intron Phase:

Intron Coordinates:

16532570 - 16542218

Intron Length:

9649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTCTATTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

81.9

0.79

0.9

80.1

Major PPT

88.6

0.87

0.7

83.4

31.3

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

58.1

0.25

1.8

72.01

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039811

16531221 - 16546366

15146