About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_166552_168564_R

Intron Information:

Intron Rank:
14
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
166552 - 168564
Intron Length:
2013

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTAAATAAA
5'SS Class:
major
3'SS Sequence:
CTTGATTTTACAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTGTTAT
U12 Branch Point Sequence:
TACTGCTTGATT
Flanking Amino Acid:
IIELDAITNKCGSNTQLLHV
Intron Amino Acid Position:
848

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.2
0.67
1
79.4
28.6
Major BPS
81.3
0.78
1.1
71.7
44.6
Major PPT
82.4
0.73
0.9
75.8
37.8
Minor 5ss
36.1
-1.6
2.8
42
39.1
Minor BPS
60.9
0.42
1.8
75.52
41.8

Associated Gene:

Gene:
DMXL2
Ensembl Gene ID:
ENSAPLG00000008330
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000038574
136000 - 191755
55756
ENSAPLT00000022556
136006 - 191755
55750
ENSAPLT00000008801
136000 - 191755
55756