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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1735972_1736456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1735972 - 1736456

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTCCTTAAAA

Flanking Amino Acid:

LRRPGRFDREVIIGTPTLMQ

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.5

0.73

0.8

81.3

36.3

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

76.6

0.83

1.3

79.26

36.6

Associated Gene:

Gene:

SPATA5L1

Ensembl Gene ID:

ENSAPLG00000004210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004329

1734895 - 1741164

6270