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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1737384_1737908_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1737384 - 1737908

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TATGTATTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATGTATTGACA

Flanking Amino Acid:

LEDVKLKLKQCIEWPMKFPQ

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.5

0.46

1.1

65.6

44.3

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

0.15

1.7

67.87

38.3

Associated Gene:

Gene:

SPATA5L1

Ensembl Gene ID:

ENSAPLG00000004210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004329

1734895 - 1741164

6270