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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17378776_17383057_R

Intron Information:

Intron Rank:

135370

Intron Class:

major

Intron Phase:

Intron Coordinates:

17378776 - 17383057

Intron Length:

4282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

CTTTCTGGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

71.6

0.54

33.1

Major PPT

86.8

0.83

0.6

80.7

31.3

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

47.5

-0.1

2.2

65.08

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020327

17377293 - 17385038

7746