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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17380228_17383057_R

Intron Information:

Intron Rank:

135372

Intron Class:

major

Intron Phase:

Intron Coordinates:

17380228 - 17383057

Intron Length:

2830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

ACAACCTCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

83.9

0.76

0.9

81.3

35.7

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

48.5

-0

1.9

64.49

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047246

17379996 - 17386976

6981

ENSAPLT00000032115

17379996 - 17385508

5513