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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17385039_17386928_R

Intron Information:

Intron Rank:

135376

Intron Class:

major

Intron Phase:

Intron Coordinates:

17385039 - 17386928

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ACTCTCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TCTTTCTTTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

73.4

0.53

0.8

65.7

35.3

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

73.8

0.83

1.6

87.49

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047246

17379996 - 17386976

6981